BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D03LP1|AL430036
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig716 1214 0.0
>3x_Contig716
Length = 3167
Score = 1214 bits (612), Expect = 0.0
Identities = 612/612 (100%)
Strand = Plus / Minus
Query: 1 atagttgaatctacagggaaatctagtaccatcagccagtatatcatctatatcatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2133 atagttgaatctacagggaaatctagtaccatcagccagtatatcatctatatcatagta 2074
Query: 61 tcccatctcggcataaatctaaggcgattctcaggaagctgaaccggcaaaatataggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2073 tcccatctcggcataaatctaaggcgattctcaggaagctgaaccggcaaaatataggct 2014
Query: 121 ggtatttggaattgtaatcttacttttggcgtttcttcaatatgagatatacaaatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013 ggtatttggaattgtaatcttacttttggcgtttcttcaatatgagatatacaaatgctt 1954
Query: 181 taaatgattttaggtttgggcttgatggctctaaatgtaaacaatagaaaagaacgcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 taaatgattttaggtttgggcttgatggctctaaatgtaaacaatagaaaagaacgcagt 1894
Query: 241 attataaagcagaagacatcgctcgctagttaacgattcttttttacgtgtttcgcgatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1893 attataaagcagaagacatcgctcgctagttaacgattcttttttacgtgtttcgcgatg 1834
Query: 301 ttgagaggaaatgcatctcgatgatataaatcacgtgattgatgcttgcacactacaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 ttgagaggaaatgcatctcgatgatataaatcacgtgattgatgcttgcacactacaaaa 1774
Query: 361 tcgtcattatatcactgtacacgattcgcatacatggctttctcgttgtccctttttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 tcgtcattatatcactgtacacgattcgcatacatggctttctcgttgtccctttttttt 1714
Query: 421 ttctcgagtttcggaacaaatcgggccatccttttcaagctgttagcggaaggacatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 ttctcgagtttcggaacaaatcgggccatccttttcaagctgttagcggaaggacatttg 1654
Query: 481 gtccgaaatacacgtaaaaatgtgcgcctacatactaaatattatgtcgccctttttccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 gtccgaaatacacgtaaaaatgtgcgcctacatactaaatattatgtcgccctttttccc 1594
Query: 541 gggatcccagtcttcacctagtaagattgctattgttgcatgtcttcccccggtacaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 gggatcccagtcttcacctagtaagattgctattgttgcatgtcttcccccggtacaaat 1534
Query: 601 gtccttaataca 612
||||||||||||
Sbjct: 1533 gtccttaataca 1522
Score = 175 bits (88), Expect = 2e-43
Identities = 154/174 (88%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 699 tacgtttcgctgctaagtggaaatcctctccttttaccgtagagcctgactattttctgt 758
||||||||||| ||||||||||||| | | |||| ||| ||||||| ||| ||| |||||
Sbjct: 1444 tacgtttcgctactaagtggaaatctttttctttaaccatagagccagacaattatctgt 1385
Query: 759 tgac-cctgctttgat-ctatgcccattgacatatgaagtataacatcacactttatata 816
||| |||||||| || ||||||||||| || | | || ||||||||| |||||||||||
Sbjct: 1384 agactcctgctttcattctatgcccattcactttttaattataacatctcactttatata 1325
Query: 817 tatatatatatatttwtatataaagtagaaaatgactgctgaaaataaagacaa 870
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 tatatatatatatttatatataaagtagaaaatgactgctgaaaataaagacaa 1271
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,247
Number of Sequences: 1807
Number of extensions: 12247
Number of successful extensions: 2089
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)